Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
PRAD rs2975748 chr2:241518989 A/G 1.73E-9 490 25.37 31.93 30.2 KM Plot
PRAD rs2975794 chr2:241515813 C/T 1.73E-9 490 25.37 31.93 30.2 KM Plot
PRAD rs2993972 chr9:97368387 A/G 1.61E-5 486 17.07 25.68 32.43 KM Plot
PRAD rs3018948 chr8:104016753 A/G 4.42E-12 479 31.07 29.08 4.87 KM Plot
PRAD rs3031405 chr2:178790795 TAAAG/T 4.13E-5 494 30.77 31.93 20.48 KM Plot
PRAD rs3066513 chr1:93603183 C/CAT 1.38E-8 488 9.17 27.13 31.37 KM Plot
PRAD rs3087457 chr1:93811917 C/T 3.67E-6 493 31.3 28.4 18.97 KM Plot
PRAD rs3088324 chr1:202694784 A/G 3.39E-5 494 24.2 28.23 31.12 KM Plot
PRAD rs3103589 chr5:171532333 T/C 1.69E-7 492 30.93 32 13.17 KM Plot
PRAD rs3103590 chr5:171532277 C/T 1.63E-7 494 30.93 32 13.17 KM Plot
PRAD rs3103591 chr5:171532229 G/A 1.66E-7 493 30.87 32 13.17 KM Plot
PRAD rs3103592 chr5:171531992 A/G 1.66E-7 493 30.87 32 13.17 KM Plot
PRAD rs3103594 chr5:171531899 G/A 1.66E-7 493 30.87 32 13.17 KM Plot
PRAD rs3111483 chr5:171532497 C/T 1.63E-7 494 30.93 32 13.17 KM Plot
PRAD rs3111484 chr5:171532397 C/T 1.63E-7 494 30.93 32 13.17 KM Plot